Browse of TCMCG057C08400 protein

CDS

Accession Number	TCMCG057C08400
gbkey	CDS
Protein Id	XP_018467897.1
Location	join(34252931..34253761,34253867..34253929,34254009..34254088,34254732..34254852,34254956..34255030,34255208..34255364,34255666..34255754,34255948..34256204,34256310..34256481,34256572..34256655,34256959..34257356,34257507..34257660,34257884..34257965,34258207..34258286,34258490..34258651,34258718..34258785,34258866..34258946,34259026..34259176)
Gene	LOC108839639
GeneID	108839639
Organism	Raphanus sativus

Protein

Length	1034aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018612395.1
Definition	PREDICTED: vacuolar protein sorting-associated protein 54, chloroplastic [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	U
Description	Vps54-like protein
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01009        [VIEW IN KEGG] ko04131        [VIEW IN KEGG]
KEGG_ko	ko:K17600        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000139        [VIEW IN EMBL-EBI] GO:0000149        [VIEW IN EMBL-EBI] GO:0000938        [VIEW IN EMBL-EBI] GO:0001894        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005794        [VIEW IN EMBL-EBI] GO:0005802        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006892        [VIEW IN EMBL-EBI] GO:0006896        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007010        [VIEW IN EMBL-EBI] GO:0007034        [VIEW IN EMBL-EBI] GO:0007041        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016192        [VIEW IN EMBL-EBI] GO:0016197        [VIEW IN EMBL-EBI] GO:0016482        [VIEW IN EMBL-EBI] GO:0019905        [VIEW IN EMBL-EBI] GO:0031090        [VIEW IN EMBL-EBI] GO:0031410        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0031982        [VIEW IN EMBL-EBI] GO:0031984        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032588        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0040008        [VIEW IN EMBL-EBI] GO:0042147        [VIEW IN EMBL-EBI] GO:0042592        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044431        [VIEW IN EMBL-EBI] GO:0044433        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045103        [VIEW IN EMBL-EBI] GO:0045104        [VIEW IN EMBL-EBI] GO:0046907        [VIEW IN EMBL-EBI] GO:0048193        [VIEW IN EMBL-EBI] GO:0048471        [VIEW IN EMBL-EBI] GO:0048871        [VIEW IN EMBL-EBI] GO:0048872        [VIEW IN EMBL-EBI] GO:0048873        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050879        [VIEW IN EMBL-EBI] GO:0050881        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051641        [VIEW IN EMBL-EBI] GO:0051649        [VIEW IN EMBL-EBI] GO:0060052        [VIEW IN EMBL-EBI] GO:0060249        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0065008        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0097708        [VIEW IN EMBL-EBI] GO:0098588        [VIEW IN EMBL-EBI] GO:0098791        [VIEW IN EMBL-EBI] GO:0099023        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGATTCGCATCCTTCCTTGATCGGAAGGTCCATCGGCAACAGCAACCGATCCAGCGTAGATCTCGGCCGTTCAATGCCTTCCTCCCCTTCCCCCTCATCGCTAACCAAATCCATCTCCGATGCGAGCAGCCAGAGCCTCTCCTCGATCCTCAACAACCCCCACGGAGGCAAATCCGGCGTCTACGGCACCGACGCCTCCTGGGTCGGCTGGTGGTCCTCCTCCACCTCCGTAGCTCCCTCCGAGTTCGCCCCCGTCGCTTCCGCCAAGCTCCCCGGGTCGGACCTCTCCAGATCCGACTTCCACGGATACGTCTCCTCGATCTCCGACTCCCACGCCAGGTTCGAGGACATCATCAACCACGCCAGGGAGGAGAGCTCGGGGCTCGATCAGGAGAGCCACGTGTCCGGTCTGGCTTCGTGTCTCCGCGAGGTCCCTTCGCTCTACTTCAAGGAGGATTTCGCGTTGGAGGACGGGGCAACGTTTCGCTCCGCGTGTCCCTTTTCGAGCTTGACGGAGAATCGGGCGCTTCAGGAGAAGCTGTCGCAGTATCTCGATGTGGTGGAGTTGCATCTCGTGAAGGAGATCTCGGTGAGGTCGGATTCGTTCTTCGAGGCGCAGGGGCAGTTGCAGGATTTGAATGGGAAGATTGTTGAAGGGTGTAGTAGGATCCGTGAGTTGAAAGAGACGATTCGGCTTCTTGATAGGAATCTGGTGGATTCTGCTCGGCAGATTCAGGAGCTGAGCTCGACTAGGATTAATATGTTGGAGCTGCAGCGTAAACTGAGGGTCATTTTGTATGTTAACCAAGCTCTCTCTGCACTCAAATTGCTTGTTGCGTCCGCAGATTGTGCTGGAGCGTTGGATATAACTGACGATCTCCAAAACTTGTTGGCGGGGGATGAGCTAACTGGTCTACATTGCTTCCGTCATCTTCGAGATCATGTCACTACTTCCATAGAATCCATAAACAGCATTCTCACAGCTGAATTTATGCGAATCTCAATACACAATACTGGGGAAATAGATGTACTGATTTTATCTGCAGCAAAAAAACGGGGATCCATATCTTCTAACGGGGAGACCGGTGATGAAGTTAAGCTAGAAGAAGAAGATACGTCTACCTTATGTGATCGGCTTCTTCCTCTAGTGATTGGATTGCTAAGAACGGCAAAGTTCCCCTCAATTTTGAGGATGTATCGTGAGGCACTAACATCTGAAATGAAAAATGCAATCAAGAACGCAGTTGCTGAGCTGCTTCCAATTCTTGTTGCAAGATCGCTCGAATCTGATTTTTCACATGGGGAGCGCTCAGTAGATGTTGATGGTGGTGGCTTATCTCTAGCGAGCAAGTTGAGGGCTCTGTCATCTGAGGCATTCGTTAATCTCTTAACTGCTATATATAGGATTGTTCAGGCACATCTTGTTCGGGCTTCGGAAGTGAAAAAGGCAATTGAATGGATCCTCTGCAATATCGATGGACATTATGCAGCTGATTCCGTTGCAGCTGCAATTGCTGTCGGTGCAGTAGCAGCCGAATCAATCCAGGAAGCAGGTTTCCAAGGCGACCAATTTGTGTCTTCTCCATTGGGTAAGGCTACCTCAAAGGCTTCTCAGTTGCAGAGAAAATCAAGCGACACATCAAGCCTGATAAACATGTCAAGAAACTTCAGGGCTGATGTCTTGAGAGAAAACACAGAAGCTGTTTTTGCGGCCTGTGAGGTTACTCATGCTAGATGGGCAAAGTTACTAGGAGTTCGTGCTCTTCTTCATCCAAAACTGAAATTGCAGGAGTTCATGAGCATTTATGATCTCACCCAAGAATTTATAACAGCTACAGAAAAGATTGGCGGACGGTTGGGATCTAGTATTCGTGGGACGCTGCAGTCACAAGCCAAAGCCTTTGTAGATTCCCAGCATGAAGCTCGGATGACAAAACTGAAAGCTGTCCTTGATCAAGAAACATGGGATGAGATCGATGTTCCCGAAGAATTCCAATCCATAATCAGTTCTCTTTTCGCATCCCAGGAGTTGATTTCTAGGAAAGCTGATGATGCTGATACTATAACATACCACAGAAACCCGCTCACTCCCAACGGGTCTCTCACTTCAGGAACTGAAGATCAAAATGAACTACGAAATAAAAACTCTGAATCTAGTGAAAGTCCTGCAGTCAGTAGTGCACAAGTGAAATCCACAGTTTCACCTGAGTCTCTTGAAAGAAGCAAGGCTGGTGTATCTTCAGTTGCGAATAATCAAAGTAATCAGAAGGCGCACGGAAAATCTAACCTTTTTTATCAAGGAGTTGGTTACCACATGGTAAACTGTGGGTTAATATTACTCAAGATGTTGTCAGAATACATTGATATGAGTAATTCTTTGCCAGCTTTGTCCTCGGAAGTTGTTCTTCGTGTTGTTGAAGTGTTGAGATTTTTCAACACTAGGACATGCCAACTTGTTCTGGGGGCTGGTGCTATGCAGGTATCTGGTTTAAAGTCCATAAAGGCGAAACACTTGGCACTTGCAAGTCAAGTAATCGACTTCACTTACACTATTATTCCTGAATCCAGAAGAATTCTGTTTTCAAAAGTACCTGAGACGAGAAAGCCACTGTTGTCAGTAGAGATTGATAGAGTCGCTCAGGATTATAGGGTTCATCGAGATGAAATATACGCAAAGCTGGTCCAGATAATGAGAGAAAGACTGTTGGCGCATCTTCATGGGTTGCCGAAAGTTGTTGAGAGCTGGAACAGACCGCCAGACAGCAATAAACAAACTAAAGAGTTTGCCTGGCCACTCACAAGGGAAGTTGGCTACCTTCATCGGGTCTTATCCGAGACATTGCATGAAGCAGATGTTCAAGCAATCTTCAGGCAGGTGATTTCAATCATCCACACACAAACTTCTCAAACGCTTTCTAACTTGGAGATAAGCTCTCCAGAGGCAAAGAAAAGGCTGAAGCTTCACGTTGAGCTTATCCTCAAATGCATCCGATCATTACCATCCGACAATGCCAATGAATCAGGCATCCCAAACTGGGGACAACTAGATGAATTCTTTGCACAACACTTTAAAGAGGAAGAAGAGGGACGCGAAACTGAGTGA

Protein:   MDSHPSLIGRSIGNSNRSSVDLGRSMPSSPSPSSLTKSISDASSQSLSSILNNPHGGKSGVYGTDASWVGWWSSSTSVAPSEFAPVASAKLPGSDLSRSDFHGYVSSISDSHARFEDIINHAREESSGLDQESHVSGLASCLREVPSLYFKEDFALEDGATFRSACPFSSLTENRALQEKLSQYLDVVELHLVKEISVRSDSFFEAQGQLQDLNGKIVEGCSRIRELKETIRLLDRNLVDSARQIQELSSTRINMLELQRKLRVILYVNQALSALKLLVASADCAGALDITDDLQNLLAGDELTGLHCFRHLRDHVTTSIESINSILTAEFMRISIHNTGEIDVLILSAAKKRGSISSNGETGDEVKLEEEDTSTLCDRLLPLVIGLLRTAKFPSILRMYREALTSEMKNAIKNAVAELLPILVARSLESDFSHGERSVDVDGGGLSLASKLRALSSEAFVNLLTAIYRIVQAHLVRASEVKKAIEWILCNIDGHYAADSVAAAIAVGAVAAESIQEAGFQGDQFVSSPLGKATSKASQLQRKSSDTSSLINMSRNFRADVLRENTEAVFAACEVTHARWAKLLGVRALLHPKLKLQEFMSIYDLTQEFITATEKIGGRLGSSIRGTLQSQAKAFVDSQHEARMTKLKAVLDQETWDEIDVPEEFQSIISSLFASQELISRKADDADTITYHRNPLTPNGSLTSGTEDQNELRNKNSESSESPAVSSAQVKSTVSPESLERSKAGVSSVANNQSNQKAHGKSNLFYQGVGYHMVNCGLILLKMLSEYIDMSNSLPALSSEVVLRVVEVLRFFNTRTCQLVLGAGAMQVSGLKSIKAKHLALASQVIDFTYTIIPESRRILFSKVPETRKPLLSVEIDRVAQDYRVHRDEIYAKLVQIMRERLLAHLHGLPKVVESWNRPPDSNKQTKEFAWPLTREVGYLHRVLSETLHEADVQAIFRQVISIIHTQTSQTLSNLEISSPEAKKRLKLHVELILKCIRSLPSDNANESGIPNWGQLDEFFAQHFKEEEEGRETE